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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs8136933 chr22:23971966 A/G IGLL3 chr22:25713888-25716191:+ 0.64 11.35 1.32E-26 Box Plot
THCA rs8137495 chr22:23972409 A/G IGLL3 chr22:25713888-25716191:+ 0.64 11.34 1.48E-26 Box Plot
THCA rs8138797 chr22:31044286 A/G ADSL chr22:40742504-40786467:+ 0.53 7.17 2.78E-12 Box Plot
THCA rs8138797 chr22:31044286 A/G AP1B1 chr22:29723669-29819168:- 0.5 6.01 3.75E-9 Box Plot
THCA rs8138797 chr22:31044286 A/G ARFGAP3 chr22:43192508-43254112:- 0.52 6.66 7.72E-11 Box Plot
THCA rs8138797 chr22:31044286 A/G C22orf40 chr22:46639911-46646193:- 0.41 6.2 1.21E-9 Box Plot
THCA rs8138797 chr22:31044286 A/G CYTSA chr22:24666786-24813707:+ 0.38 5.88 7.78E-9 Box Plot
THCA rs8138797 chr22:31044286 A/G DGCR6L chr22:20301799-20307603:- 0.42 6.39 3.93E-10 Box Plot
THCA rs8138797 chr22:31044286 A/G GGA1 chr22:38004482-38029571:+ 0.46 6.09 2.35E-9 Box Plot
THCA rs8138797 chr22:31044286 A/G KLHL22 chr22:20795806-20850170:- 0.52 6.69 6.25E-11 Box Plot
THCA rs8138797 chr22:31044286 A/G L3MBTL2 chr22:41601209-41627275:+ 0.61 6.67 7.12E-11 Box Plot
THCA rs8138797 chr22:31044286 A/G LZTR1 chr22:21333751-21353327:+ 0.48 6.19 1.31E-9 Box Plot
THCA rs8138797 chr22:31044286 A/G PI4KA chr22:21061979-21213705:- 0.36 5.9 6.71E-9 Box Plot
THCA rs8138797 chr22:31044286 A/G POLR2F chr22:38348614-38437922:+ 0.4 6.45 2.81E-10 Box Plot
THCA rs8138797 chr22:31044286 A/G PPIL2 chr22:22020298-22054304:+ 0.52 6.57 1.34E-10 Box Plot